Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907157.1_cds_XP_016457291.1_51031
CDS Infomation

[gene=LOC107781157] [db_xref=GeneID:107781157] [protein=protein IQ-DOMAIN 1] [protein_id=XP_016457291.1] [location=join(115928..115993,116073..116327,117257..117484,117566..117679,117759..118421)] [gbkey=CDS]
Sequence

ATGGGTGCTTCTGGAAAATGGGTGAAAGCTTTGATAGGATTCAAGAAGTCTGAAAAAGAA
GATCATGAGAAGGTGAGTGGAAAGAGCAAGAAATGGAAGCTGTGGAGGAGTTCATCAGTG
GATATTGGAGGGTCTACGTGGAAGGGATTTAAGCACAGAAATGGTGGTGTTGGGTCAGAA
GGGTCAGATTCATCATCAGTGAACAATGAAGCTTACTCAGCTGCTGTAGCTACTGTGGTT
AGAGCTCCTCCTAAAGATTTTAAAGCAGTGAGGGAAGAATGGGCTGCTATCAGGATTCAA
ACTGCCTTTCGTGGTTTCTTGGCAAGAAGAGCATTAAGGGCCTTGAAAGGATTGGTAAGG
CTTCAAGCACTTGTTAGGGGCAGACAAGTAAGGAAGCAGGCTGCAGTCACTCTTAGGTGT
ATGCAAGCTCTGGTTCGGGTACAAGCTCGTGTTAGAGCTCGTCGTGTCCGTATGTCTATA
GAGGGGCAAGCTGTACAGAAGATACTAGAGGAACACCGTGGCAAACTTGATCCTTTGAAA
GAAGCTGAGGAAGGATGGTGTGACCTTAAAGGAACTCTTGAAGAGGTTAAAACAAAGATA
CAAATGAGGCAAGAGGGAGTCTTAAAAAGAGAAAGAGCACTTGCATACTCTCAAGCTCAA
AAGCAGTCAAAATCAAGCCAGAATTTTGATTCTAGAACCACTATCTCGGTTCCATCTCTC
AAAAATCTTGATTATGATAAGAGTAATTGTGGATGGAGTTGGTTAGAACGTTGGATGGCA
GCGCGGCCATGGGAAAACAGATTGATGGAACAAGCTTATAACGATTCTTTGGAGACCACA
CCAAAGGCTAAGGACAATCAGTTGAAGACATCTGAACCTTGCTCTGTGAAAGTGAAGAAG
AACAATATGACCAAAAGGATATCAGCAAAACCTCCGTTGGTGATAGGCCACACTACTCGT
TCTTCATCAAGCCCGAGTTCTGAATTCAGATATGATGAGAGTTCAGCTTCCTCTTCATTC
TGCACATCAACAACGCCAATATCCGGGAACACAATGTTGGCATCAGATAGGACTGAAGAC
AGCAATAGTAGTCGACCAAATTACATGAGCCTAACTGAGTCAACGAAGGCCAAGCAGAGA
AATCAGAGAATCCTTAGACAGTCAATGGATGAGTTCCAGTTTCTTAAGAACTCTGGCTTA
CTTAGTAATGGTGACTCGAAGAGTTGTGCTGGTTATGACAATATGACAAGGCCTCTTTGT
CTTCCTACTCGAATGGATAAATTATCTAGACCAAGGGACAAAGAGAATTGTGCCGGTTTT
GAGTAA

Peptide Sequence

PEP ID

XP_016457291.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 1 [Nicotiana tabacum]
Sequence

MGASGKWVKALIGFKKSEKEDHEKVSGKSKKWKLWRSSSVDIGGSTWKGFKHRNGGVGSE
GSDSSSVNNEAYSAAVATVVRAPPKDFKAVREEWAAIRIQTAFRGFLARRALRALKGLVR
LQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQKILEEHRGKLDPLK
EAEEGWCDLKGTLEEVKTKIQMRQEGVLKRERALAYSQAQKQSKSSQNFDSRTTISVPSL
KNLDYDKSNCGWSWLERWMAARPWENRLMEQAYNDSLETTPKAKDNQLKTSEPCSVKVKK
NNMTKRISAKPPLVIGHTTRSSSSPSSEFRYDESSASSSFCTSTTPISGNTMLASDRTED
SNSSRPNYMSLTESTKAKQRNQRILRQSMDEFQFLKNSGLLSNGDSKSCAGYDNMTRPLC
LPTRMDKLSRPRDKENCAGFE

Transcript Sequence

Gene sequence data has not been registered.